1. Home
  2. Species
  3. Pyrrosia piloselloides
  4. Sequence
  5. Ppi_g04961

Ppi_g04961 (VPS24.1)


Aliases : VPS24.1

Description : component *(VPS24) of ESCRT-III complex & original description: none


Gene families : OG0004411 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004411_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g04961

Target Alias Description ECC score Gene Family Method Actions
Adi_g016215 VPS24.2, VPS24 component *(VPS24) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g10118 VPS24.1 component *(VPS24) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007213 VPS24.2, VPS24 component *(VPS24) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Spa_g50547 VPS24.1 component *(VPS24) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 21 185
No external refs found!