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  5. Ppi_g04396

Ppi_g04396 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : TUB-type transcription factor & original description: none


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g04396

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene10994.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020603.38 AtTLP5, TLP5 RNA biosynthesis.transcriptional activation.TUB... 0.01 OrthoFinder output from all 47 species
Dde_g06633 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24073 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010999001 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder output from all 47 species
GSVIVT01034528001 AtTLP1, TLP1 RNA biosynthesis.transcriptional activation.TUB... 0.05 OrthoFinder output from all 47 species
LOC_Os01g64700.2 TLP10, AtTLP10,... transcription factor (TUB) 0.05 OrthoFinder output from all 47 species
LOC_Os05g48670.1 AtTLP7, TLP7,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
LOC_Os12g06630.2 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Mp6g01640.1 AtTLP3, TLP3 transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Smo85745 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
Solyc02g085130.4.1 TLP2, AtTLP2,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Solyc04g071440.3.1 AtTLP1, TLP1,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Zm00001e024653_P002 AtTLP1, TLP1,... transcription factor (TUB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000007 Tubby_C 123 412
IPR001810 F-box_dom 62 107
No external refs found!