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  5. Ppi_g03980

Ppi_g03980


Description : Rab GTPase-activating protein & original description: none


Gene families : OG0001869 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001869_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g03980

Target Alias Description ECC score Gene Family Method Actions
Adi_g022435 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13842 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013092 No alias Rab GTPase-activating protein & original description: CDS=1-2967 0.03 OrthoFinder output from all 47 species
Cba_g26668 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22906 No alias Rab GTPase-activating protein & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g04454 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14940 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00844 No alias RAB-GTPase-activating protein (RAB-GAP) 0.02 OrthoFinder output from all 47 species
LOC_Os05g38950.1 LOC_Os05g38950 RAB-GTPase-activating protein (RAB-GAP) 0.02 OrthoFinder output from all 47 species
Lfl_g02360 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09441 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11813 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020038 No alias Rab GTPase-activating protein & original description:... 0.02 OrthoFinder output from all 47 species
Solyc04g009560.3.1 Solyc04g009560 RAB-GTPase-activating protein (RAB-GAP) 0.04 OrthoFinder output from all 47 species
Spa_g12612 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06662 No alias Rab GTPase-activaTing protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 221 447
No external refs found!