Ppi_g03970


Description : component *(SYF1/MAC9) of MAC spliceosome-associated complex & original description: none


Gene families : OG0005359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005359_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g03970

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00243220 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Adi_g108555 No alias component *(SYF1/MAC9) of MAC spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Aev_g05498 No alias component *(SYF1/MAC9) of MAC spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Aob_g02364 No alias component *(SYF1/MAC9) of MAC spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Cre12.g513500 No alias RNA processing.RNA splicing.spliceosome-associated... 0.01 OrthoFinder output from all 47 species
Dcu_g04960 No alias component *(SYF1/MAC9) of MAC spliceosome-associated... 0.05 OrthoFinder output from all 47 species
Ehy_g20388 No alias component *(SYF1/MAC9) of MAC spliceosome-associated... 0.04 OrthoFinder output from all 47 species
GSVIVT01006714001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder output from all 47 species
LOC_Os07g44970.1 LOC_Os07g44970 component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.02 OrthoFinder output from all 47 species
Mp4g15330.1 No alias component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.02 OrthoFinder output from all 47 species
Smo79566 No alias RNA processing.RNA splicing.spliceosome-associated... 0.08 OrthoFinder output from all 47 species
Solyc01g086990.3.1 Solyc01g086990 component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.04 OrthoFinder output from all 47 species
Zm00001e010869_P001 Zm00001e010869 component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.06 OrthoFinder output from all 47 species
Zm00001e035711_P001 Zm00001e035711 component SYF1/MAC9 of non-snRNP MOS4-associated complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 457 485
No external refs found!