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Ppi_g03943 (HSP93-V, DCA1,...)


Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1

Description : chaperone component *(ClpC) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g03943
Cluster HCCA: Cluster_314

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00042430 CLPB3, CLPB-P,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AT5G50920 HSP93-V, DCA1,... CLPC homologue 1 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042669 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original... 0.06 OrthoFinder output from all 47 species
Ceric.30G013400.1 SAG15, CLPD,... chaperone component *(ClpD) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001416.7 SAG15, CLPD, ERD1 No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001416.8 HSP93-III,... Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre43.g760497 HSP93-V, DCA1,... Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Msp_g23938 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Pnu_g20880 ATHSP101, HOT1, HSP101 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g36359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23892 SAG15, CLPD, ERD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014692_P001 SAG15, CLPD,... chaperone component ClpD of chloroplast Clp-type protease complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 818 897
IPR041546 ClpA/ClpB_AAA_lid 438 539
IPR004176 Clp_R_dom 109 161
IPR004176 Clp_R_dom 185 236
IPR003959 ATPase_AAA_core 637 812
IPR003959 ATPase_AAA_core 300 429
No external refs found!