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  5. Ppi_g03941

Ppi_g03941


Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g03941
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00081210 AT-TCP20, TCP20,... RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00171910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
AT1G69690 No alias TCP family transcription factor 0.02 OrthoFinder output from all 47 species
AT2G45680 No alias TCP family transcription factor 0.02 OrthoFinder output from all 47 species
Adi_g055980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074351 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15454 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G017100.1 Ceric.02G017100 TCP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g02339 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Mp7g09490.1 No alias transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Nbi_g24235 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13050 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27632 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g006800.1.1 Solyc03g006800 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc03g116320.3.1 AtTCP14, TCP14,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc09g008030.1.1 Solyc09g008030 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Spa_g16929 No alias TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023066_P001 Zm00001e023066 transcription factor (TCP). CHE circadian clock repression factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 171 273
No external refs found!