Ppi_g03917 (PRH75)

Aliases : PRH75

Description : not classified & original description: none

Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g03917

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00092p00127820	PMH2, ATRH53,...	RNA processing.organelle machineries.RNA...	0.04	OrthoFinder output from all 47 species
Ala_g23186	emb1138	group-II intron splicing RNA helicase *(RH3) & original...	0.02	OrthoFinder output from all 47 species
Cba_g01233	PRH75	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g10256	PRH75	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os12g41715.1	PMH2, ATRH53,...	RNA helicase (PMH)	0.04	OrthoFinder output from all 47 species
Lfl_g38604	PRH75	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_17924g0010	PRH75	DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Ore_g07399	emb1138	group-II intron splicing RNA helicase *(RH3) & original...	0.03	OrthoFinder output from all 47 species
Ore_g10670	PRH75	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g007010.4.1	PRH75, Solyc03g007010	DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia...	0.06	OrthoFinder output from all 47 species
Spa_g08414	emb1138	group-II intron splicing RNA helicase *(RH3) & original...	0.04	OrthoFinder output from all 47 species
Tin_g15128	PRH75	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR012562	GUCT	539	633
IPR001650	Helicase_C	347	449
IPR011545	DEAD/DEAH_box_helicase_dom	127	304

External Links

No external refs found!