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  5. Ppi_g03750

Ppi_g03750 (CDC73, PHP)


Aliases : CDC73, PHP

Description : component *(CDC73/PHP) of PAF1C transcription initiation and elongation complex & original description: none


Gene families : OG0005658 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g03750

Target Alias Description ECC score Gene Family Method Actions
Adi_g025017 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Ceric.14G052600.1 CDC73, PHP,... component *(CDC73/PHP) of PAF1C transcription initiation... 0.04 OrthoFinder output from all 47 species
Cre02.g104550 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
LOC_Os03g46190.1 CDC73, PHP,... component CDC73/PHP of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Lfl_g04658 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Mp1g17000.1 CDC73, PHP component CDC73/PHP of PAF1C transcription initiation... 0.04 OrthoFinder output from all 47 species
Ore_g40644 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Pir_g10744 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Zm00001e012326_P001 CDC73, PHP,... component CDC73/PHP of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR031336 CDC73_C 316 467
IPR032041 Cdc73_N 2 150
No external refs found!