LOC_Os10g33874.1


Description : Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana (sp|q9lmy5|ppr41_arath : 530.0)


Gene families : OG_01_0011533 (Archaeplastida) Phylogenetic Tree(s): OG_01_0011533_tree ,
OG_02_0011433 (LandPlants) Phylogenetic Tree(s): OG_02_0011433_tree ,
OG_03_0011536 (SeedPlants) Phylogenetic Tree(s): OG_03_0011536_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g33874.1
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00070910 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
AT1G13630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 Archaeplastida
GSVIVT01010112001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
MA_137810g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
AMTR_s00148p00070910 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 LandPlants
AT1G13630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 LandPlants
GSVIVT01010112001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 LandPlants
MA_137810g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 LandPlants
AMTR_s00148p00070910 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 SeedPlants
AT1G13630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 SeedPlants
GSVIVT01010112001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 SeedPlants
MA_137810g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 586 635
IPR002885 Pentatricopeptide_repeat 217 248
IPR002885 Pentatricopeptide_repeat 658 704
IPR002885 Pentatricopeptide_repeat 517 565
IPR002885 Pentatricopeptide_repeat 375 424
IPR002885 Pentatricopeptide_repeat 274 319
IPR002885 Pentatricopeptide_repeat 442 473
IPR002885 Pentatricopeptide_repeat 343 373
IPR002885 Pentatricopeptide_repeat 730 759
IPR002885 Pentatricopeptide_repeat 171 198
No external refs found!