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  5. Ppi_g03707

Ppi_g03707


Description : RlmN-type rRNA methyltransferase & original description: none


Gene families : OG0001131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001131_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g03707

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00221620 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G60230 No alias Radical SAM superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g114284 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04071 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000113.127 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre02.g109250 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre05.g238500 No alias No description available 0.01 OrthoFinder output from all 47 species
Lfl_g08220 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13438 No alias RlmN-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02553 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0001897 cytolysis by symbiont of host cells IEP HCCA
BP GO:0001907 killing by symbiont of host cells IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
MF GO:0090729 toxin activity IEP HCCA
InterPro domains Description Start Stop
IPR007197 rSAM 126 283
No external refs found!