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Ppi_g03637


Description : component *(RRP43) of exosome EXO9 core complex & original description: none


Gene families : OG0006392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g03637
Cluster HCCA: Cluster_298

Target Alias Description ECC score Gene Family Method Actions
Als_g11671 No alias component *(RRP43) of exosome EXO9 core complex &... 0.03 OrthoFinder output from all 47 species
Ceric.10G033100.1 Ceric.10G033100 component *(RRP43) of exosome EXO9 core complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os11g20689.1 LOC_Os11g20689 component RRP43 of exosome EXO9 core complex 0.03 OrthoFinder output from all 47 species
Ore_g20594 No alias component *(RRP43) of exosome EXO9 core complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011215 No alias component *(RRP43) of exosome EXO9 core complex &... 0.02 OrthoFinder output from all 47 species
Solyc06g075390.4.1 Solyc06g075390 component RRP43 of exosome EXO9 core complex 0.02 OrthoFinder output from all 47 species
Spa_g10848 No alias component *(RRP43) of exosome EXO9 core complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e003688_P003 Zm00001e003688 component RRP43 of exosome EXO9 core complex 0.02 OrthoFinder output from all 47 species
Zm00001e021990_P001 Zm00001e021990 component RRP43 of exosome EXO9 core complex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001247 ExoRNase_PH_dom1 47 180
No external refs found!