Aliases : PSBB
Description : component *(PsbB/CP47) of PS-II reaction center complex & original description: none
Gene families : OG0000641 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000641_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aev_g08305 | |
Cluster | HCCA: Cluster_60 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00240100 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 39 species | |
AMTR_s00585p00000100 | PSBB,... | Photosynthesis.photophosphorylation.photosystem II.PS-II... | 0.04 | OrthoFinder output from all 39 species | |
ATCG00680 | PSBB | photosystem II reaction center protein B | 0.08 | OrthoFinder output from all 39 species | |
Adi_g005798 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.02 | OrthoFinder output from all 39 species | |
Als_g00826 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.06 | OrthoFinder output from all 39 species | |
Aob_g02288 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.14 | OrthoFinder output from all 39 species | |
Aop_g01303 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.05 | OrthoFinder output from all 39 species | |
Azfi_s0001.g000196 | No alias | not classified & original description: CDS=1-402 | 0.03 | OrthoFinder output from all 39 species | |
Cba_g02603 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.06 | OrthoFinder output from all 39 species | |
Ceric.02G013400.1 | PSBB, Ceric.02G013400 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.05 | OrthoFinder output from all 39 species | |
Ceric.02G015500.1 | PSBB, Ceric.02G015500 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.02 | OrthoFinder output from all 39 species | |
Ceric.05G041400.1 | PSBB, Ceric.05G041400 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.14 | OrthoFinder output from all 39 species | |
Ceric.05G051100.1 | PSBB, Ceric.05G051100 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.1 | OrthoFinder output from all 39 species | |
Ceric.14G009600.1 | PSBB, Ceric.14G009600 | not classified & original description: pacid=50634641... | 0.05 | OrthoFinder output from all 39 species | |
Ceric.19G038500.1 | PSBB, Ceric.19G038500 | not classified & original description: pacid=50576616... | 0.02 | OrthoFinder output from all 39 species | |
Ceric.1Z019400.1 | PSBB, Ceric.1Z019400 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.06 | OrthoFinder output from all 39 species | |
Ceric.1Z021200.1 | PSBB, Ceric.1Z021200 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.07 | OrthoFinder output from all 39 species | |
Ceric.1Z162800.1 | PSBB, Ceric.1Z162800 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.08 | OrthoFinder output from all 39 species | |
Ceric.30G038800.1 | PSBB, Ceric.30G038800 | not classified & original description: pacid=50609266... | 0.03 | OrthoFinder output from all 39 species | |
Ceric.38G008000.1 | PSBB, Ceric.38G008000 | component *(PsbB/CP47) of PS-II reaction center complex... | 0.14 | OrthoFinder output from all 39 species | |
Dac_g09466 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.02 | OrthoFinder output from all 39 species | |
Dcu_g21021 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.13 | OrthoFinder output from all 39 species | |
Dde_g03407 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.01 | OrthoFinder output from all 39 species | |
Ehy_g04818 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.01 | OrthoFinder output from all 39 species | |
GSVIVT01006503001 | PSBB | Photosystem II CP47 reaction center protein OS=Phaseolus vulgaris | 0.06 | OrthoFinder output from all 39 species | |
Gb_20140 | PSBB | Photosystem II CP47 reaction center protein OS=Cycas... | 0.01 | OrthoFinder output from all 39 species | |
Gb_23566 | PSBB | Photosystem II CP47 reaction center protein OS=Cycas... | 0.13 | OrthoFinder output from all 39 species | |
Gb_23567 | PSBB | component PsbB/CP47 of PS-II reaction center complex | 0.13 | OrthoFinder output from all 39 species | |
Gb_27294 | PSBB | Photosystem II CP47 reaction center protein OS=Cycas... | 0.12 | OrthoFinder output from all 39 species | |
Gb_32720 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 39 species | |
Gb_40206 | PSBB | Photosystem II CP47 reaction center protein... | 0.02 | OrthoFinder output from all 39 species | |
Gb_41659 | PSBB | component PsbTc of PS-II complex | 0.11 | OrthoFinder output from all 39 species | |
LOC_Os06g39708.1 | PSBB, LOC_Os06g39708 | component PsbB/CP47 of PS-II reaction center complex | 0.09 | OrthoFinder output from all 39 species | |
LOC_Os09g04680.1 | PSBB, LOC_Os09g04680 | Photosystem II CP47 reaction center protein OS=Oryza... | 0.08 | OrthoFinder output from all 39 species | |
LOC_Os10g21310.1 | PSBB, LOC_Os10g21310 | component PsbB/CP47 of PS-II reaction center complex | 0.09 | OrthoFinder output from all 39 species | |
LOC_Os12g10600.1 | PSBB, LOC_Os12g10600 | Photosystem II CP47 reaction center protein OS=Oryza... | 0.02 | OrthoFinder output from all 39 species | |
Len_g02818 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.02 | OrthoFinder output from all 39 species | |
Lfl_g04892 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.21 | OrthoFinder output from all 39 species | |
MA_4447313g0010 | PSBB | Photosystem II CP47 reaction center protein OS=Pinus... | 0.01 | OrthoFinder output from all 39 species | |
Mpzg01020.1 | PSBB | component PsbB/CP47 of PS-II reaction center complex | 0.06 | OrthoFinder output from all 39 species | |
Msp_g21439 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.04 | OrthoFinder output from all 39 species | |
Nbi_g00884 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.01 | OrthoFinder output from all 39 species | |
Ore_g02100 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.07 | OrthoFinder output from all 39 species | |
Pir_g05119 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.08 | OrthoFinder output from all 39 species | |
Pnu_g00696 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.02 | OrthoFinder output from all 39 species | |
Ppi_g02251 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.11 | OrthoFinder output from all 39 species | |
Sacu_v1.1_s0004.g002254 | PSBB | not classified & original description: CDS=1-408 | 0.05 | OrthoFinder output from all 39 species | |
Sacu_v1.1_s0138.g022569 | No alias | not classified & original description: CDS=1-444 | 0.05 | OrthoFinder output from all 39 species | |
Sam_g10281 | No alias | component *(PsbB/CP47) of PS-II reaction center complex... | 0.07 | OrthoFinder output from all 39 species | |
Smo137729 | PSBB | Photosystem II CP47 reaction center protein OS=Angiopteris evecta | 0.05 | OrthoFinder output from all 39 species | |
Solyc00g500024.1.1 | PSBB, Solyc00g500024 | component PsbB/CP47 of PS-II reaction center complex | 0.08 | OrthoFinder output from all 39 species | |
Solyc00g500071.1.1 | PSBB, Solyc00g500071 | component PsbB/CP47 of PS-II reaction center complex | 0.08 | OrthoFinder output from all 39 species | |
Spa_g04296 | PSBB | component *(PsbB/CP47) of PS-II reaction center complex... | 0.05 | OrthoFinder output from all 39 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0009521 | photosystem | IEA | Interproscan |
BP | GO:0009767 | photosynthetic electron transport chain | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
MF | GO:0016168 | chlorophyll binding | IEA | Interproscan |
BP | GO:0019684 | photosynthesis, light reaction | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003954 | NADH dehydrogenase activity | IEP | HCCA |
MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
CC | GO:0009579 | thylakoid | IEP | HCCA |
BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
MF | GO:0016984 | ribulose-bisphosphate carboxylase activity | IEP | HCCA |
BP | GO:0017004 | cytochrome complex assembly | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
MF | GO:0020037 | heme binding | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000932 | PS_antenna-like | 1 | 500 |
No external refs found! |