- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : OTP84
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00175270 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g31790... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00065p00031420 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00078p00195340 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G02330 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g06600 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16632 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g16783 | DOT4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g16840 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g05755 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06770 | OTP86 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g19105 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g26613 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g28190 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g31288 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g55101 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g55228 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g010913 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-1608 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0048.g030454 | No alias | not classified & original description: CDS=2-2074 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0078.g038295 | No alias | not classified & original description: CDS=1-2334 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0081.g038640 | OTP86 | not classified & original description: CDS=63-2522 | 0.08 | OrthoFinder output from all 47 species | |
| Azfi_s0254.g060431 | No alias | not classified & original description: CDS=1-2856 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g06120 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07238 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11529 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20535 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g44509 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G124700.1 | Ceric.01G124700 | not classified & original description: pacid=50591887... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.22G009800.1 | Ceric.22G009800 | not classified & original description: pacid=50615356... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.32G026500.1 | CRR2, Ceric.32G026500 | not classified & original description: pacid=50597944... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.35G034300.1 | Ceric.35G034300 | not classified & original description: pacid=50581547... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g10590 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21941 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g30262 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g38380 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g44035 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05943 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g10204 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g15390 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28695 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46524 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01008407001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os03g64370.1 | LOC_Os03g64370 | Pentatricopeptide repeat-containing protein At5g52850,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03322 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03784 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g04137 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g15365 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17356 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17539 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17561 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g17785 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18979 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g19003 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19020 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g20486 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g22535 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g23070 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g23194 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g30737 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g44147 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g54969 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05728 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g11189 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g15222 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g40602 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_138676g0010 | EMB2261 | RNA editing factor (ECD1) | 0.02 | OrthoFinder output from all 47 species | |
| MA_17949g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_30949g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_681272g0010 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_71104g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.05 | OrthoFinder output from all 47 species | |
| MA_8678g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| MA_89214g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_9415113g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| MA_953793g0020 | DOT4 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g02461 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g04447 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g04473 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g05129 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g06837 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g13692 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g16806 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17747 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g22512 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g23157 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g23170 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g23186 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g27928 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g29683 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g34496 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g34539 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g44842 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g45693 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g06160 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g07805 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g16041 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g22679 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g24057 | EMB2758 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g24804 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g31889 | MEF21 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g38344 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g02967 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g11772 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g12795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13541 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g20548 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g54471 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g57700 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g61472 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0244.g026669 | No alias | not classified & original description: CDS=1-2394 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11266 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13748 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g38969 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g098150.3.1 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g025700.2.1 | Solyc03g025700 | OTP70 plastidial RNA splicing factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g082170.4.1 | Solyc09g082170 | Pentatricopeptide repeat-containing protein At4g14820... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g082450.1.1 | Solyc09g082450 | RNA editing factor (YS1) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g01746 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g06160 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06501 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07311 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11708 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12641 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g13790 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14145 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g18959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20468 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21662 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g22684 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g22980 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23113 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23544 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23605 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23609 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23799 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g23972 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23976 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g24976 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g26362 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26517 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26703 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g27467 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g30214 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g32588 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g39327 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g39514 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g39519 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g40518 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g45297 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g45669 | CRR22 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g45689 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g47991 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50886 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g53497 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g56737 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g56842 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44226 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e002552_P001 | Zm00001e002552 | RNA editing factor (SEL1/PDM1) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003605_P001 | DOT4, Zm00001e003605 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031351_P001 | EMB2261, Zm00001e031351 | RNA editing factor (ECD1) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034445_P001 | LPA66, Zm00001e034445 | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 177 | 205 |
| IPR002885 | Pentatricopeptide_repeat | 376 | 404 |
| IPR032867 | DYW_dom | 893 | 980 |
| IPR002885 | Pentatricopeptide_repeat | 674 | 722 |
| IPR002885 | Pentatricopeptide_repeat | 474 | 520 |
| IPR002885 | Pentatricopeptide_repeat | 275 | 322 |
| IPR002885 | Pentatricopeptide_repeat | 574 | 622 |
| No external refs found! |