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  5. Ppi_g03042

Ppi_g03042


Description : not classified & original description: none


Gene families : OG0004526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004526_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g03042
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AT1G19880 No alias Regulator of chromosome condensation (RCC1) family protein 0.03 OrthoFinder output from all 47 species
Aev_g02380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26653 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009847001 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
MA_20218g0010 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g42049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020043 No alias not classified & original description: CDS=36-1622 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP HCCA
BP GO:0000492 box C/D snoRNP assembly IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 123 169
IPR000408 Reg_chr_condens 71 120
IPR000408 Reg_chr_condens 180 238
IPR000408 Reg_chr_condens 242 294
IPR000408 Reg_chr_condens 348 393
No external refs found!