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  5. Ppi_g02875

Ppi_g02875


Description : E3 ubiquitin ligase *(LOG2/LUL) & original description: none


Gene families : OG0000967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02875

Target Alias Description ECC score Gene Family Method Actions
AT3G53410 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g01738 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g00773 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G073200.1 Ceric.08G073200 E3 ubiquitin ligase *(LOG2/LUL) & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os05g33000.2 LOC_Os05g33000 Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g02259 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11244 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02478 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017116 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description:... 0.02 OrthoFinder output from all 47 species
Solyc01g098750.3.1 Solyc01g098750 Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g30446 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03998 No alias E3 ubiquiTin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!