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  5. Ppi_g02830

Ppi_g02830


Description : substrate adaptor *(DHU1) of CUL4-based ubiquitin ligase complex & original description: none


Gene families : OG0001739 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02830

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020902.59 No alias Transcription initiation factor TFIID subunit 5... 0.01 OrthoFinder output from all 47 species
Dac_g03179 No alias component *(WDR5/SWD3) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
LOC_Os03g51550.2 LOC_Os03g51550 component WDR5 of COMPASS histone trimethylation complex 0.02 OrthoFinder output from all 47 species
Solyc02g091790.3.1 Solyc02g091790 component WDR5 of COMPASS histone trimethylation complex 0.02 OrthoFinder output from all 47 species
Solyc09g065290.4.1 Solyc09g065290 component WDR5 of COMPASS histone trimethylation complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 98 136
IPR001680 WD40_repeat 271 309
IPR001680 WD40_repeat 183 221
IPR001680 WD40_repeat 225 266
DisclaimerIPR001680 WD40_repeat 15 52
IPR001680 WD40_repeat 140 178
IPR001680 WD40_repeat 56 94
No external refs found!