Ppi_g02642


Description : not classified & original description: none


Gene families : OG0003765 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003765_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02642

Target Alias Description ECC score Gene Family Method Actions
Aop_g12048 No alias TruB-type tRNA pseudouridine synthase & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23893.t1 Aspi01Gene23893 TruB-type tRNA pseudouridine synthase & original... 0.04 OrthoFinder output from all 47 species
Ceric.07G028400.1 Ceric.07G028400 TruB-type tRNA pseudouridine synthase & original... 0.04 OrthoFinder output from all 47 species
Dcu_g21012 No alias TruB-type tRNA pseudouridine synthase & original... 0.06 OrthoFinder output from all 47 species
Mp5g11570.1 No alias tRNA pseudouridine synthase (TruB) 0.02 OrthoFinder output from all 47 species
Ppi_g35631 No alias TruB-type tRNA pseudouridine synthase & original... 0.03 OrthoFinder output from all 47 species
Sam_g26745 No alias TruB-type tRNA pseudouridine synthase & original... 0.04 OrthoFinder output from all 47 species
Solyc02g093460.4.1 Solyc02g093460 tRNA pseudouridine synthase (TruB) 0.02 OrthoFinder output from all 47 species
Spa_g51764 No alias TruB-type tRNA pseudouridine synthase & original... 0.04 OrthoFinder output from all 47 species
Zm00001e029672_P001 Zm00001e029672 tRNA pseudouridine synthase (TruB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!