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  5. Ppi_g02625

Ppi_g02625 (RPL18)


Aliases : RPL18

Description : component *(eL18) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02625
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT3G05590 RPL18 ribosomal protein L18 0.02 OrthoFinder output from all 47 species
Adi_g013370 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g064904 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g086060 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g11456 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.09G043000.1 RPL18, Ceric.09G043000 component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.38G049200.1 RPL18, Ceric.38G049200 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre12.g512600 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
Dac_g03575 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g41478 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01028036001 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01031168001 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01035120001 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os03g22180.1 LOC_Os03g22180 component RPL18 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os05g06310.1 LOC_Os05g06310 component RPL18 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os07g47780.1 LOC_Os07g47780 component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp1g22500.1 No alias component RPL18 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Nbi_g06518 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g11427 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g45259 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo267976 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc01g099900.4.1 RPL18, Solyc01g099900 component RPL18 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc09g075290.3.1 RPL18, Solyc09g075290 component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g19308 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Spa_g21425 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g50566 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e026750_P001 Zm00001e026750 component RPL18 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e031155_P001 Zm00001e031155 component RPL18 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e035836_P001 Zm00001e035836 component RPL18 of LSU proteome component 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 2 187
No external refs found!