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  5. Ppi_g02397

Ppi_g02397 (SFR6)


Aliases : SFR6

Description : component *(MED16) of tail module of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0004636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004636_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02397

Target Alias Description ECC score Gene Family Method Actions
Aev_g01581 SFR6 component *(MED16) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Ala_g22100 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Ehy_g07130 SFR6 component *(MED16) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
GSVIVT01004520001 SFR6 Mediator of RNA polymerase II transcription subunit 16... 0.02 OrthoFinder output from all 47 species
LOC_Os10g35560.1 SFR6, LOC_Os10g35560 component MED16 of tail module of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Len_g21218 SFR6 component *(MED16) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Pnu_g08539 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!