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  5. Ppi_g02287

Ppi_g02287


Description : not classified & original description: none


Gene families : OG0006136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02287

Target Alias Description ECC score Gene Family Method Actions
Als_g11250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08831 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g01240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G079000.1 Ceric.01G079000 not classified & original description: pacid=50590763... 0.02 OrthoFinder output from all 47 species
Dcu_g15187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09687 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18054 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 235 283
IPR002885 Pentatricopeptide_repeat 512 535
IPR002885 Pentatricopeptide_repeat 652 678
IPR002885 Pentatricopeptide_repeat 544 568
IPR002885 Pentatricopeptide_repeat 613 643
IPR002885 Pentatricopeptide_repeat 684 713
IPR002885 Pentatricopeptide_repeat 208 227
No external refs found!