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  5. Ppi_g02255

Ppi_g02255 (ATMYB3R5, MYB3R-5)


Aliases : ATMYB3R5, MYB3R-5

Description : R1R2R3-MYB transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272410 AtMYB98, MYB98,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00252990 AtMYB124,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00012p00208260 MYB3R-3,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.02 OrthoFinder output from all 47 species
Adi_g081416 ATMYB119, MYB119 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103147 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ala_g28266 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Als_g15721 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Als_g47836 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G051800.1 MYB88, AtMYB88,... MYB class-R2R3 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G036500.1 MYB56, AtMYB56,... MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Dac_g04675 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008484001 MYB54, ATMYB54 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
LOC_Os01g74590.1 MYBR1, MYB44,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os08g33800.1 LOF2, MYB105,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_120049g0010 MYBR1, MYB44,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Mp5g14610.1 MYB77 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Pnu_g06130 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Pnu_g11690 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Smo6091 AtMYB117, LOF1, MYB117 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Smo80553 BW52, ATMYB52, MYB52 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 105 151
IPR001005 SANT/Myb 157 200
IPR001005 SANT/Myb 53 99
No external refs found!