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Ppi_g02189


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02189
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Adi_g078867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g32654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G034800.1 Ceric.23G034800 not classified & original description: pacid=50611547... 0.03 OrthoFinder output from all 47 species
Dde_g25869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g03240.1 LOC_Os07g03240 RNA-binding protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Pir_g07014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g014820.4.1 Solyc04g014820 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g26277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 111 169
IPR000504 RRM_dom 8 65
No external refs found!