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  5. Ppi_g02178

Ppi_g02178 (CDC20.1)


Aliases : CDC20.1

Description : substrate specificity component *(CDC20) of APC/C E3 ubiquitin ligase complex & original description: none


Gene families : OG0001302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001302_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02178

Target Alias Description ECC score Gene Family Method Actions
Aop_g69550 CDC20.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33325 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
LOC_Os02g47180.2 CDC20.1, LOC_Os02g47180 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.02 OrthoFinder output from all 47 species
Len_g15657 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Pir_g61736 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018225 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Spa_g22565 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 269 304
IPR001680 WD40_repeat 399 434
IPR001680 WD40_repeat 315 349
IPR024977 Apc4_WD40_dom 188 244
No external refs found!