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  5. Ppi_g02157

Ppi_g02157


Description : not classified & original description: none


Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02157
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
Als_g27744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G039500.1 Ceric.13G039500 not classified & original description: pacid=50635975... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001086.2 No alias No description available 0.01 OrthoFinder output from all 47 species
Lfl_g04673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012218 No alias not classified & original description: CDS=101-1345 0.02 OrthoFinder output from all 47 species
Smo177305 No alias Protein RETICULATA-RELATED 5, chloroplastic... 0.02 OrthoFinder output from all 47 species
Spa_g09022 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0070939 Dsl1/NZR complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 177 354
No external refs found!