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  5. Ppi_g02034

Ppi_g02034


Description : component *(LHCq) of LHC-II complex & original description: none


Gene families : OG0006405 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02034
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00112770 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AT1G76570 No alias Chlorophyll A-B binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g044529 No alias component *(LHCq) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g00780 No alias component *(LHCq) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g20424 No alias component *(LHCq) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene39603.t1 Aspi01Gene39603 component *(LHCq) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G013700.1 Ceric.10G013700 component *(LHCq) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Dcu_g14212 No alias component *(LHCq) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20366 No alias component *(LHCq) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013450001 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
LOC_Os09g12540.1 LOC_Os09g12540 component LHCq of LHC-II complex 0.04 OrthoFinder output from all 47 species
Len_g11645 No alias component *(LHCq) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10372 No alias component *(LHCq) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Mp8g12010.1 No alias component LHCq of LHC-II complex 0.02 OrthoFinder output from all 47 species
Nbi_g09744 No alias component *(LHCq) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02997 No alias component *(LHCq) of LHC-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g00398 No alias component *(LHCq) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08686 No alias component *(LHCq) of LHC-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003763 No alias not classified & original description: CDS=1-1404 0.03 OrthoFinder output from all 47 species
Sam_g11969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g20615 No alias component *(LHCq) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Smo104804 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Spa_g05023 No alias component *(LHCq) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e033739_P001 Zm00001e033739 component LHCq of LHC-II complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 118 293
No external refs found!