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  5. Ppi_g01950

Ppi_g01950


Description : component *(YIP5) of trans-Golgi-network (TGN) trafficking complex & original description: none


Gene families : OG0002556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g01950

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00035800 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G27490 No alias Integral membrane Yip1 family protein 0.02 OrthoFinder output from all 47 species
Als_g41018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G102000.1 Ceric.05G102000 component *(YIP5) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Ceric.36G047200.1 Ceric.36G047200 component *(YIP5) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Dde_g09141 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Ehy_g03392 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Len_g28734 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.05 OrthoFinder output from all 47 species
Mp1g05520.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g00434 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Ore_g36692 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Pir_g03350 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015840 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Solyc01g098900.3.1 Solyc01g098900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e020670_P001 Zm00001e020670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR006977 Yip1_dom 107 267
No external refs found!