Ppi_g01891

Description : adaptor component *(ClpS) of chloroplast Clp-type protease complex & original description: none

Gene families : OG0005952 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005952_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g01891
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
Ala_g00971	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
Cba_g00591	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.05	OrthoFinder output from all 47 species
Ceric.39G010100.1	Ceric.39G010100	adaptor component *(ClpS) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
GSVIVT01008253001	No alias	Protein degradation.peptidase families.serine-type...	0.03	OrthoFinder output from all 47 species
LOC_Os08g33540.1	LOC_Os08g33540	adaptor component ClpS of chloroplast Clp-type protease complex	0.02	OrthoFinder output from all 47 species
Len_g04580	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
Lfl_g00995	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Nbi_g00525	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
Tin_g00248	No alias	adaptor component *(ClpS) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0030163	protein catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003769	ClpS_core	89	155

External Links

No external refs found!