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  5. Ppi_g01380

Ppi_g01380 (CAMTA3, SR1)


Aliases : CAMTA3, SR1

Description : CAMTA-type transcription factor & original description: none


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g01380

Target Alias Description ECC score Gene Family Method Actions
Adi_g016712 No alias CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13747 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07423 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01862.t1 Aspi01Gene01862 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11230 No alias CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g34966 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_16615g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g22018 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g40792 No alias CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08907 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10937 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19783 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g105230.4.1 Solyc01g105230 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Spa_g30645 No alias CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10857 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 906 923
IPR000048 IQ_motif_EF-hand-BS 930 947
IPR002909 IPT_dom 489 573
IPR005559 CG-1_dom 28 140
IPR002110 Ankyrin_rpt 695 782
No external refs found!