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  5. Ppi_g01375

Ppi_g01375 (ATPRP40A, PRP40A)


Aliases : ATPRP40A, PRP40A

Description : pre-mRNA-processing protein *(PRP40A/B) & original description: none


Gene families : OG0002189 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002189_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g01375

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00227470 ATPRP40A,... RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder output from all 47 species
AT3G19670 ATPRP40B, PRP40B pre-mRNA-processing protein 40B 0.05 OrthoFinder output from all 47 species
Adi_g079667 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.03 OrthoFinder output from all 47 species
Adi_g109853 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.02 OrthoFinder output from all 47 species
Ala_g02608 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.02 OrthoFinder output from all 47 species
Ala_g12867 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.04 OrthoFinder output from all 47 species
Als_g08024 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.03 OrthoFinder output from all 47 species
Als_g23383 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.03 OrthoFinder output from all 47 species
Aob_g02355 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.03 OrthoFinder output from all 47 species
Aop_g14297 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025576 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0486.g073429 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.04 OrthoFinder output from all 47 species
Ceric.06G057100.1 ATPRP40A,... pre-mRNA-processing protein *(PRP40A/B) & original... 0.03 OrthoFinder output from all 47 species
Ceric.36G014500.1 ATPRP40A,... pre-mRNA-processing protein *(PRP40A/B) & original... 0.03 OrthoFinder output from all 47 species
Cre07.g351000 ATPRP40A, PRP40A RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder output from all 47 species
Dac_g31177 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g33711 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.08 OrthoFinder output from all 47 species
Dde_g04452 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g02927 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g29464 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01009302001 ATPRP40A, PRP40A RNA processing.RNA splicing.U2-type-intron-specific... 0.04 OrthoFinder output from all 47 species
Len_g11234 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g04256 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.06 OrthoFinder output from all 47 species
Lfl_g08148 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.06 OrthoFinder output from all 47 species
MA_10433850g0010 ATPRP40A, PRP40A pre-mRNA-processing protein (PRP40A/B) 0.04 OrthoFinder output from all 47 species
Mp2g00410.1 ATPRP40A, PRP40A pre-mRNA-processing protein (PRP40A/B) 0.03 OrthoFinder output from all 47 species
Msp_g06186 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g29655 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.02 OrthoFinder output from all 47 species
Ore_g17451 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.03 OrthoFinder output from all 47 species
Ore_g37601 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.02 OrthoFinder output from all 47 species
Ore_g40944 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.03 OrthoFinder output from all 47 species
Pir_g15971 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.03 OrthoFinder output from all 47 species
Pir_g18693 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.03 OrthoFinder output from all 47 species
Sam_g13746 No alias pre-mRNA-processing protein *(PRP40A/B) & original... 0.04 OrthoFinder output from all 47 species
Sam_g40479 No alias pre-mRNA-processing protein *(PRP40A/B) & original... 0.03 OrthoFinder output from all 47 species
Solyc07g022760.4.1 ATPRP40A,... pre-mRNA-processing protein (PRP40A/B) 0.05 OrthoFinder output from all 47 species
Spa_g09384 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.02 OrthoFinder output from all 47 species
Spa_g10390 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.03 OrthoFinder output from all 47 species
Tin_g21928 ATPRP40A, PRP40A pre-mRNA-processing protein *(PRP40A/B) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e020775_P002 ATPRP40A,... pre-mRNA-processing protein (PRP40A/B) 0.04 OrthoFinder output from all 47 species
Zm00001e020778_P001 ATPRP40A,... pre-mRNA-processing protein (PRP40A/B) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002713 FF_domain 662 711
IPR002713 FF_domain 527 576
IPR002713 FF_domain 594 644
IPR002713 FF_domain 736 791
IPR001202 WW_dom 291 318
IPR001202 WW_dom 334 359
No external refs found!