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  5. Ppi_g01341

Ppi_g01341 (PMS1)


Aliases : PMS1

Description : component *(PMS1) of MLH1-PMS1 heterodimer & original description: none


Gene families : OG0005197 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005197_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g01341
Cluster HCCA: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
Aev_g04838 PMS1 component *(PMS1) of MLH1-PMS1 heterodimer & original... 0.03 OrthoFinder output from all 47 species
Sam_g14037 No alias component *(PMS1) of MLH1-PMS1 heterodimer & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
MF GO:0030983 mismatched DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR014790 MutL_C 693 866
IPR013507 DNA_mismatch_S5_2-like 223 341
No external refs found!