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  5. Ppi_g01326

Ppi_g01326


Description : scaffold component *(GANP/SAC3) of TREX-2 mRNP trafficking complex & original description: none


Gene families : OG0001595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001595_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g01326

Target Alias Description ECC score Gene Family Method Actions
Cba_g37895 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.06 OrthoFinder output from all 47 species
Cba_g62248 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.03 OrthoFinder output from all 47 species
Ceric.18G038000.1 Ceric.18G038000 scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.03 OrthoFinder output from all 47 species
Dde_g50320 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.06 OrthoFinder output from all 47 species
LOC_Os07g45160.1 LOC_Os07g45160 scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.02 OrthoFinder output from all 47 species
MA_491667g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g37699 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.03 OrthoFinder output from all 47 species
Pnu_g26444 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.04 OrthoFinder output from all 47 species
Tin_g09793 No alias scaffold component *(GANP/SAC3) of TREX-2 mRNP... 0.04 OrthoFinder output from all 47 species
Zm00001e035716_P003 Zm00001e035716 scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR005062 SAC3/GANP/THP3_conserved 517 802
No external refs found!