AMTR_s00085p00032940 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00085.9

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.YABBY transcription factor


Gene families : OG_01_0000890 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000890_tree ,
OG_02_0006725 (LandPlants) Phylogenetic Tree(s): OG_02_0006725_tree ,
OG_03_0004255 (SeedPlants) Phylogenetic Tree(s): OG_03_0004255_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00085p00032940
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.07 Archaeplastida
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.1 Archaeplastida
AT4G00180 YAB3 Plant-specific transcription factor YABBY family protein 0.03 Archaeplastida
GSVIVT01012246001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01013778001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01015567001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01027648001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01037533001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
LOC_Os02g42950.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
LOC_Os03g11600.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
LOC_Os04g45330.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
LOC_Os07g06620.2 No alias transcription factor (YABBY) 0.03 Archaeplastida
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.08 Archaeplastida
LOC_Os12g42610.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
MA_10432332g0010 No alias transcription factor (YABBY) 0.04 Archaeplastida
Solyc01g010240.3.1 No alias transcription factor (YABBY) 0.06 Archaeplastida
Solyc01g091010.3.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Solyc05g012050.4.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Solyc08g079100.3.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e000845_P005 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e004396_P001 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e007412_P003 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e012387_P001 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e012388_P001 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e015245_P002 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e035310_P003 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e038717_P002 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e041322_P001 No alias transcription factor (YABBY) 0.02 Archaeplastida
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.1 LandPlants
AT4G00180 YAB3 Plant-specific transcription factor YABBY family protein 0.03 LandPlants
GSVIVT01027648001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
LOC_Os02g42950.1 No alias transcription factor (YABBY) 0.03 LandPlants
LOC_Os04g45330.1 No alias transcription factor (YABBY) 0.03 LandPlants
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.08 LandPlants
Solyc01g091010.3.1 No alias transcription factor (YABBY) 0.03 LandPlants
Solyc08g079100.3.1 No alias transcription factor (YABBY) 0.03 LandPlants
Zm00001e004396_P001 No alias transcription factor (YABBY) 0.02 LandPlants
Zm00001e007412_P003 No alias transcription factor (YABBY) 0.02 LandPlants
Zm00001e015245_P002 No alias transcription factor (YABBY) 0.02 LandPlants
Zm00001e041322_P001 No alias transcription factor (YABBY) 0.02 LandPlants
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.08 SeedPlants
AT4G00180 YAB3 Plant-specific transcription factor YABBY family protein 0.03 SeedPlants
LOC_Os02g42950.1 No alias transcription factor (YABBY) 0.02 SeedPlants
LOC_Os04g45330.1 No alias transcription factor (YABBY) 0.02 SeedPlants
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.06 SeedPlants
Solyc01g091010.3.1 No alias transcription factor (YABBY) 0.02 SeedPlants
Solyc08g079100.3.1 No alias transcription factor (YABBY) 0.03 SeedPlants
Zm00001e004396_P001 No alias transcription factor (YABBY) 0.02 SeedPlants
Zm00001e015245_P002 No alias transcription factor (YABBY) 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006780 YABBY 12 177
No external refs found!