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  5. Zm00001d025435

Zm00001d025435 (GRMZM2G072174)


Aliases : GRMZM2G072174

Description : 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). Photosystem II reaction center PsbP family protein


Gene families : OG_01_0006819 (Gene family) Phylogenetic Tree(s): OG0006819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d025435
Cluster HCCA cluster: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT2G28605 No alias Photosystem II reaction center PsbP family protein 0.02 Gene family
GSVIVT01022331001 No alias 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.1 Gene family
LOC_Os04g35530 Os04g0434900 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.12 Gene family
Smo91861 PACid_15418600 No description available 0.02 Gene family
Solyc04g009420.3.1 Solyc04g009420.3 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan
CC GO:0009523 photosystem II IEA InterProScan
CC GO:0009654 photosystem II oxygen evolving complex IEA InterProScan
BP GO:0015979 photosynthesis IEA InterProScan
CC GO:0019898 extrinsic component of membrane IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002683 PsbP_C 92 245
No external refs found!