No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species Als_g30196 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species Als_g30426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species Als_g30566 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species Als_g30718 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species Als_g30845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species Als_g38981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species Als_g54924 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species Als_g55233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species Als_g55271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species Aob_g07355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species Aob_g07955 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species Aop_g01606 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species Aop_g02232 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species Aop_g02588 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species Aop_g04126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species Aop_g05235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species Aop_g05682 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species Aop_g06104 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species Aop_g08755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species Aop_g09302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species Aop_g16410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species Aop_g16487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species Aop_g16491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species Aop_g16505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species Aop_g16511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species Aop_g16522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species Aop_g16533 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species Aop_g16783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species Aop_g16834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species Aop_g16842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species Aop_g16854 EMB2758 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species Aop_g17428 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species Ppi_g00990 details
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  4. Sequence
  5. Ppi_g00990

Ppi_g00990


Description : RNA editing factor *(OZ) & original description: none


Gene families : OG0001673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001673_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g00990

Target Alias Description ECC score Gene Family Method Actions
AT1G55040 No alias zinc finger (Ran-binding) family protein 0.02 OrthoFinder output from all 47 species
Ala_g19541 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12366 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0661.g081440 No alias RNA editing factor *(OZ) & original description: CDS=90-3326 0.04 OrthoFinder output from all 47 species
Ceric.26G046600.1 Ceric.26G046600 RNA editing factor *(OZ) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g11704 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36546 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25260 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18300 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000088001 No alias Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01008444001 No alias Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g10630.1 LOC_Os01g10630 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g50430.1 LOC_Os03g50430 RNA editing factor (OZ-type) 0.03 OrthoFinder output from all 47 species
Lfl_g06216 No alias RNA editing factor *(OZ) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10436123g0010 No alias RNA editing factor (OZ-type) 0.02 OrthoFinder output from all 47 species
MA_7499122g0010 No alias RNA editing factor (OZ-type) 0.02 OrthoFinder output from all 47 species
Pir_g04568 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06378 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07101 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50896 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11918 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
CC GO:0043625 delta DNA polymerase complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 399 425
No external refs found!