Ppi_g00755

Description : not classified & original description: none

Gene families : OG0000926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000926_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g00755

Target	Alias	Description	ECC score	Gene Family Method
AT2G03130	No alias	Ribosomal protein L12/ ATP-dependent Clp protease...	0.01	OrthoFinder output from all 47 species
Adi_g054026	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g19876	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g17077	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g11519	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g00437	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g02148	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g05009	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g32424	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_360415g0010	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Nbi_g03436	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g06189	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006553	No alias	not classified & original description: CDS=1-564	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014213	No alias	not classified & original description: CDS=1-594	0.03	OrthoFinder output from all 47 species
Sam_g25874	No alias	component *(bL12m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Sam_g25875	No alias	component *(bL12m) of large mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Solyc02g088760.2.1	Solyc02g088760	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Solyc09g010030.3.1	Solyc09g010030	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Spa_g09129	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g09130	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g41346	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g07592	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0005681	spliceosomal complex	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013823	Ribosomal_L7/L12_C	209	275
IPR008932	Ribosomal_L7/L12_oligo	144	191

External Links

No external refs found!

Ppi_g00755

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation