Ppi_g00617

Description : assembly factor involved in RuBisCo assembly *(RbcX) & original description: none

Gene families : OG0005102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005102_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g00617

Target	Alias	Description	ECC score	Gene Family Method
Adi_g000502	No alias	assembly factor involved in RuBisCo assembly *(RbcX) &...	0.02	OrthoFinder output from all 47 species
Aev_g05175	No alias	assembly factor involved in RuBisCo assembly *(RbcX) &...	0.02	OrthoFinder output from all 47 species
Aop_g00191	No alias	assembly factor involved in RuBisCo assembly *(RbcX) &...	0.02	OrthoFinder output from all 47 species
Cba_g46690	No alias	assembly factor involved in RuBisCo assembly *(RbcX) &...	0.03	OrthoFinder output from all 47 species
Dac_g08983	No alias	assembly factor involved in RuBisCo assembly *(RbcX) &...	0.03	OrthoFinder output from all 47 species
GSVIVT01025257001	No alias	Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat...	0.04	OrthoFinder output from all 47 species
Gb_02160	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os03g59320.1	LOC_Os03g59320	RbcX assembly factor involved in RuBisCo assembly	0.02	OrthoFinder output from all 47 species
MA_129980g0010	No alias	RbcX assembly factor involved in RuBisCo assembly	0.05	OrthoFinder output from all 47 species
Mp1g26500.1	No alias	RbcX assembly factor involved in RuBisCo assembly	0.02	OrthoFinder output from all 47 species
Ore_g04011	No alias	assembly factor involved in RuBisCo assembly *(RbcX) &...	0.03	OrthoFinder output from all 47 species
Pnu_g13514	No alias	assembly factor involved in RuBisCo assembly *(RbcX) &...	0.02	OrthoFinder output from all 47 species
Sam_g25402	No alias	assembly factor involved in RuBisCo assembly *(RbcX) &...	0.05	OrthoFinder output from all 47 species
Spa_g13070	No alias	assembly factor involved in RuBisCo assembly *(RbcX) &...	0.04	OrthoFinder output from all 47 species
Zm00001e011815_P001	Zm00001e011815	RbcX assembly factor involved in RuBisCo assembly	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
MF	GO:0044183	protein folding chaperone	IEA	Interproscan
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0110102	ribulose bisphosphate carboxylase complex assembly	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0004743	pyruvate kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030955	potassium ion binding	IEP	HCCA
MF	GO:0031420	alkali metal ion binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003435	Chaperonin_RcbX	83	184

External Links

No external refs found!

Ppi_g00617

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation