Description : GARP subgroup PHL transcription factor & original description: none
Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00142p00049490 | evm_27.TU.AmTr_v1... | Nutrient uptake.phosphorus assimilation.phosphate... | 0.02 | OrthoFinder output from all 47 species | |
AT1G14600 | No alias | Homeodomain-like superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
AT2G01060 | No alias | myb-like HTH transcriptional regulator family protein | 0.02 | OrthoFinder output from all 47 species | |
AT3G04450 | No alias | Homeodomain-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G13040 | No alias | myb-like HTH transcriptional regulator family protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g006433 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Adi_g081643 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Als_g03610 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Als_g04353 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Als_g30198 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Als_g32729 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0093.g043264 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g74466 | No alias | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
Ceric.21G027900.1 | Ceric.21G027900 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.21G076700.1 | Ceric.21G076700 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.28G068700.1 | Ceric.28G068700 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g34786 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g43193 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01021225001 | No alias | Putative Myb family transcription factor At1g14600... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01033515001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g40710.1 | LOC_Os06g40710 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g45410.1 | APL, WDY, LOC_Os06g45410 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os08g06370.1 | KAN2, LOC_Os08g06370 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os08g33750.1 | LOC_Os08g33750 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g39550.1 | LOC_Os10g39550 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
MA_10432937g0010 | KAN4, ATS | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
MA_335624g0020 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Mp4g01560.1 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
Mp4g08700.1 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g06713 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g03399 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g59890 | No alias | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g06354 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0004.g002208 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g27536 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Smo405704 | KAN4, ATS | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g008480.2.1 | Solyc04g008480 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g045000.4.1 | Solyc07g045000 | Putative Myb family transcription factor At1g14600... | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g085620.2.1 | Solyc10g085620 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Spa_g05502 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g22306 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g24824 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e001526_P001 | Zm00001e001526 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0009605 | response to external stimulus | IEP | HCCA |
BP | GO:0009606 | tropism | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010274 | hydrotropism | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0042545 | cell wall modification | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
BP | GO:0071555 | cell wall organization | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |