LOC_Os10g28665.1


Description : Pentatricopeptide repeat-containing protein At1g03100, mitochondrial OS=Arabidopsis thaliana (sp|q9sa60|ppr6_arath : 743.0)


Gene families : OG_01_0001060 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001060_tree ,
OG_02_0001470 (LandPlants) Phylogenetic Tree(s): OG_02_0001470_tree ,
OG_03_0003417 (SeedPlants) Phylogenetic Tree(s): OG_03_0003417_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g28665.1

Target Alias Description ECC score Gene Family Method Actions
MA_118036g0010 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.03 Archaeplastida
MA_46631g0010 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.03 Archaeplastida
Solyc01g088750.3.1 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.07 Archaeplastida
Solyc04g008410.3.1 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.03 Archaeplastida
AMTR_s00019p00220910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g03100,... 0.02 LandPlants
AT1G03100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 LandPlants
AT1G69290 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 LandPlants
MA_118036g0010 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.03 LandPlants
MA_46631g0010 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.03 LandPlants
Solyc01g088750.3.1 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.06 LandPlants
Solyc04g008410.3.1 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.03 LandPlants
Zm00001e019596_P001 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.02 LandPlants
AMTR_s00019p00220910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g03100,... 0.02 SeedPlants
AT1G03100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 SeedPlants
MA_118036g0010 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.03 SeedPlants
Solyc04g008410.3.1 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 316 343
IPR002885 Pentatricopeptide_repeat 512 527
IPR002885 Pentatricopeptide_repeat 481 506
IPR002885 Pentatricopeptide_repeat 620 663
No external refs found!