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  5. AMTR_s05659p00002430

AMTR_s05659p00002430 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold05659.2

Description : Cytochrome c oxidase subunit 2 OS=Oryza sativa subsp. japonica


Gene families : OG0003824 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003824_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s05659p00002430

Target Alias Description ECC score Gene Family Method Actions
AMTR_s05659p00000220 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
ATMG00160 COX2 cytochrome oxidase 2 0.04 OrthoFinder output from all 47 species
ATMG01280 ORF291 Cytochrome C oxidase subunit II-like, transmembrane domain 0.04 OrthoFinder output from all 47 species
Ceric.01G098900.1 COX2, Ceric.01G098900 not classified & original description: pacid=50592848... 0.02 OrthoFinder output from all 47 species
Ceric.1Z257900.1 COX2, Ceric.1Z257900 not classified & original description: pacid=50586471... 0.02 OrthoFinder output from all 47 species
Dde_g00367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09391 COX2 component *(COX2) of cytochrome c oxidase complex &... 0.02 OrthoFinder output from all 47 species
Gb_08948 COX2 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.04 OrthoFinder output from all 47 species
Gb_17977 COX2 Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_34804 No alias Cytochrome c oxidase subunit 2 OS=Glycine max... 0.02 OrthoFinder output from all 47 species
MA_10435550g0020 COX2 Cytochrome c oxidase subunit 2 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_10436044g0020 COX2 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.02 OrthoFinder output from all 47 species
Nbi_g26482 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g05198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61967 COX2 component *(COX2) of cytochrome c oxidase complex &... 0.02 OrthoFinder output from all 47 species
Solyc00g500101.1.1 COX2, Solyc00g500101 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 OrthoFinder output from all 47 species
Solyc00g500118.1.1 COX2, Solyc00g500118 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 OrthoFinder output from all 47 species
Solyc00g500244.1.1 COX2, Solyc00g500244 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 OrthoFinder output from all 47 species
Solyc00g500275.1.1 COX2, Solyc00g500275 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 OrthoFinder output from all 47 species
Solyc00g500359.1.1 COX2, Solyc00g500359 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 OrthoFinder output from all 47 species
Spa_g21715 COX2 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEA Interproscan
MF GO:0005507 copper ion binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002429 CcO_II-like_C 1 57
No external refs found!