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  5. AMTR_s02929p00000180

AMTR_s02929p00000180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold02929.1

No description available


Gene families : OG0001225 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001225_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s02929p00000180
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Aev_g17149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G039200.1 Ceric.02G039200 not classified & original description: pacid=50584117... 0.04 OrthoFinder output from all 47 species
Dac_g45937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g14530.1 LOC_Os06g14530 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_17498g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g06353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023485_P001 Zm00001e023485 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!