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  5. AMTR_s02838p00004170

AMTR_s02838p00004170 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold02838.1

No description available


Gene families : OG0002596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002596_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s02838p00004170
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00493p00011600 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.04 OrthoFinder output from all 47 species
AT4G03070 AOP1, AOP, AOP1.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.04 OrthoFinder output from all 47 species
AT4G23340 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 OrthoFinder output from all 47 species
Aob_g27240 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.05 OrthoFinder output from all 47 species
Gb_24086 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_26940 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.04 OrthoFinder output from all 47 species
Gb_26942 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.06 OrthoFinder output from all 47 species
Gb_26943 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1... 0.03 OrthoFinder output from all 47 species
Gb_27025 No alias Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_27753 No alias Probable 2-oxoglutarate-dependent dioxygenase JRG21... 0.03 OrthoFinder output from all 47 species
Gb_30273 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.02 OrthoFinder output from all 47 species
Gb_41080 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.04 OrthoFinder output from all 47 species
Gb_41081 No alias Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.04 OrthoFinder output from all 47 species
MA_10431230g0010 No alias Probable 2-oxoglutarate-dependent dioxygenase ANS... 0.02 OrthoFinder output from all 47 species
MA_130111g0010 No alias Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_316459g0010 No alias Gibberellin 20-oxidase-like protein OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_488753g0010 No alias 2-oxoglutarate-dependent dioxygenase DAO OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc01g006580.4.1 Solyc01g006580 Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.04 OrthoFinder output from all 47 species
Solyc03g025490.3.1 Solyc03g025490 Gibberellin 20-oxidase-like protein OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc06g066840.3.1 Solyc06g066840 Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.05 OrthoFinder output from all 47 species
Solyc06g067860.3.1 Solyc06g067860 Probable 2-oxoglutarate-dependent dioxygenase AOP1.2... 0.02 OrthoFinder output from all 47 species
Solyc12g042980.2.1 Solyc12g042980 Probable 2-oxoglutarate-dependent dioxygenase AOP1... 0.05 OrthoFinder output from all 47 species
Zm00001e036345_P001 Zm00001e036345 Probable 2-oxoglutarate-dependent dioxygenase AOP1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA

No InterPro domains available for this sequence

No external refs found!