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  5. AMTR_s02547p00008880

AMTR_s02547p00008880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold02547.1

Description : Probable calcium-binding protein CML43 OS=Arabidopsis thaliana


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s02547p00008880

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00316p00011560 UNE14,... Probable calcium-binding protein CML43 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Aev_g00406 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51395 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24593 CML43 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06373.t1 UNE14, Aspi01Gene06373 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene34907.t1 UNE14, Aspi01Gene34907 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34910.t1 UNE14, Aspi01Gene34910 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G067000.1 Ceric.17G067000 not classified & original description: pacid=50618804... 0.09 OrthoFinder output from all 47 species
Dcu_g39031 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_28443 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_103558g0010 UNE14 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_224196g0010 CML42 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_269415g0010 AGD11 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_393053g0010 CML41 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_641437g0010 CML42 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_822732g0010 CML39, CML37 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g20470.1 UNE14 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Solyc04g058160.2.1 Solyc04g058160 Probable calcium-binding protein CML44 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g03807 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25390 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011992 EF-hand-dom_pair 72 133
No external refs found!