AMTR_s02003p00008260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold02003.1

Description : Dirigent protein 21 OS=Arabidopsis thaliana


Gene families : OG0000104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s02003p00008260

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene51144.t1 Aspi01Gene51144 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0062.g035225 No alias not classified & original description: CDS=1-588 0.02 OrthoFinder output from all 47 species
Ceric.1Z030800.1 Ceric.1Z030800 not classified & original description: pacid=50598811... 0.05 OrthoFinder output from all 47 species
Ceric.1Z090700.1 Ceric.1Z090700 not classified & original description: pacid=50637007... 0.03 OrthoFinder output from all 47 species
Ceric.1Z090900.1 Ceric.1Z090900 not classified & original description: pacid=50637002... 0.03 OrthoFinder output from all 47 species
Ceric.1Z091100.1 Ceric.1Z091100 not classified & original description: pacid=50637006... 0.03 OrthoFinder output from all 47 species
Ceric.1Z198600.1 Ceric.1Z198600 not classified & original description: pacid=50577058... 0.05 OrthoFinder output from all 47 species
Ceric.1Z283200.1 Ceric.1Z283200 not classified & original description: pacid=50576968... 0.03 OrthoFinder output from all 47 species
Ceric.38G030000.1 Ceric.38G030000 not classified & original description: pacid=50579806... 0.04 OrthoFinder output from all 47 species
Ceric.38G030400.1 Ceric.38G030400 not classified & original description: pacid=50580264... 0.05 OrthoFinder output from all 47 species
Dcu_g35004 No alias stereoselective coupling control protein *(DIRIGENT) &... 0.03 OrthoFinder output from all 47 species
MA_10426515g0010 No alias Dirigent protein 11 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_7362860g0010 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e039498_P001 Zm00001e039498 Dirigent protein 19 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
InterPro domains Description Start Stop
IPR004265 Dirigent 36 181
No external refs found!