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  5. AMTR_s01360p00009540

AMTR_s01360p00009540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold01360.1

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s01360p00009540

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00117910 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00237380 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
AMTR_s00060p00059830 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
AMTR_s00066p00157220 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00084p00087230 PTAC15,... RNA biosynthesis.organelle... 0.06 OrthoFinder output from all 47 species
AT1G61980 No alias Mitochondrial transcription termination factor family protein 0.02 OrthoFinder output from all 47 species
AT1G62110 No alias Mitochondrial transcription termination factor family protein 0.02 OrthoFinder output from all 47 species
AT3G46950 No alias Mitochondrial transcription termination factor family protein 0.04 OrthoFinder output from all 47 species
Gb_00751 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Gb_07257 PTAC15 TAC15 cofactor of plastid-encoded RNA polymerase.... 0.04 OrthoFinder output from all 47 species
Gb_13847 PTAC15 TAC15 cofactor of plastid-encoded RNA polymerase.... 0.03 OrthoFinder output from all 47 species
Gb_15878 No alias transcription factor (mTERF) 0.07 OrthoFinder output from all 47 species
Gb_26213 No alias transcription factor (mTERF) 0.05 OrthoFinder output from all 47 species
Gb_31439 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Gb_39322 No alias transcription factor (mTERF) 0.05 OrthoFinder output from all 47 species
LOC_Os05g33440.1 LOC_Os05g33440 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g33460.2 LOC_Os05g33460 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
LOC_Os06g12070.1 LOC_Os06g12070 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g12110.1 LOC_Os06g12110 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
LOC_Os07g24090.1 LOC_Os07g24090 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
MA_31885g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Pir_g33567 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g082010.3.1 Solyc02g082010 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
Solyc04g011700.2.1 Solyc04g011700 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Solyc04g072530.2.1 Solyc04g072530 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Solyc04g072550.3.1 Solyc04g072550 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
Zm00001e027097_P001 Zm00001e027097 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006260 DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 34 238
IPR003690 MTERF 199 306
No external refs found!