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  5. AMTR_s01349p00000840

AMTR_s01349p00000840 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold01349.1

No description available


Gene families : OG0001064 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s01349p00000840

Target Alias Description ECC score Gene Family Method Actions
Aev_g31212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01223 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02772 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene33680.t1 Aspi01Gene33680 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0176.g056054 No alias not classified & original description: CDS=1-2004 0.03 OrthoFinder output from all 47 species
Cba_g02504 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020816.130 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020908.3 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os08g13890.1 LOC_Os08g13890 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g03766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10686 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008303 No alias not classified & original description: CDS=17-973 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!