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  5. AMTR_s01016p00008750

AMTR_s01016p00008750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold01016.1

Description : ABC transporter G family member 22 OS=Arabidopsis thaliana


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s01016p00008750
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g06139.1 LOC_Os03g06139 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Lfl_g12498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06753 No alias sporopollenin precursor exporter *(ABCG26) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g29010 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53521 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000439_P004 Zm00001e000439 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!