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Aliases : evm_27.TU.AmTr_v1.0_scaffold00439.2
Description : Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00138570 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00030p00109240 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00127300 | MEF22,... | Pentatricopeptide repeat-containing protein At3g12770... | 0.05 | OrthoFinder output from all 47 species | |
| AT4G01030 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G25270 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G59600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g042866 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g087181 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g46569 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07468 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16335 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16531 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16615 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g22597 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g34015 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g05667 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g26561 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g39960 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g02869 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g12045 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g14625 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g16102 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27470 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28686 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g30099 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene03412.t2 | Aspi01Gene03412 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene03718.t1 | Aspi01Gene03718 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene04185.t1 | Aspi01Gene04185 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene11731.t1 | Aspi01Gene11731 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene11765.t1 | EMB2261, Aspi01Gene11765 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene23472.t1 | CRR22, Aspi01Gene23472 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene29787.t2 | Aspi01Gene29787 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008305 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: CDS=82-2724 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008648 | No alias | not classified & original description: CDS=1-2118 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009250 | DOT4 | not classified & original description: CDS=1-1692 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011300 | No alias | not classified & original description: CDS=1-2337 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0090.g042642 | No alias | not classified & original description: CDS=39-695 | 0.08 | OrthoFinder output from all 47 species | |
| Azfi_s0098.g043939 | EMB2758 | not classified & original description: CDS=1-1746 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0129.g048869 | No alias | not classified & original description: CDS=1-2157 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0144.g051584 | No alias | not classified & original description: CDS=1-1965 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0188.g056770 | OTP84 | not classified & original description: CDS=1-2469 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0228.g059086 | No alias | not classified & original description: CDS=12-1547 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0254.g060431 | No alias | not classified & original description: CDS=1-2856 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0303.g063784 | No alias | not classified & original description: CDS=1-1617 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g11527 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20102 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g24553 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g44509 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67460 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67808 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67906 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G003900.1 | Ceric.19G003900 | not classified & original description: pacid=50575192... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z254100.1 | Ceric.1Z254100 | not classified & original description: pacid=50632850... | 0.08 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000342.38 | No alias | Pentatricopeptide repeat-containing protein At5g02860... | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g483720 | No alias | Cell cycle.organelle machineries.DNA... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g18037 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30466 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g38493 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g42553 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g45717 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06945 | CRR22 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g10909 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g17190 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g47858 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g47862 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g24902 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26347 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46323 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g14704 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g25136 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01003650001 | OTP80 | RNA processing.organelle machineries.RNA... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_03545 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g51790.1 | LOC_Os01g51790 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05435 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g18445 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g32845 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Len_g40474 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g54059 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_153011g0010 | MEF1 | RNA editing factor (MEF1) | 0.04 | OrthoFinder output from all 47 species | |
| MA_59599g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.08 | OrthoFinder output from all 47 species | |
| MA_6329g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g14332 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g23168 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g23170 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g31719 | LOI1, MEF11 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g34226 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g43136 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g48629 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04303 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g07151 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g09711 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g10323 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g23628 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g38398 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g18756 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g60415 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63456 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g27073 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0002.g001030 | No alias | not classified & original description: CDS=1-1857 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0029.g010179 | No alias | not classified & original description: CDS=88-2685 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0037.g011812 | OTP84 | not classified & original description: CDS=1-1944 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0072.g016959 | No alias | not classified & original description: CDS=1-1596 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0152.g023491 | No alias | not classified & original description: CDS=1-2331 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0208.g025848 | No alias | not classified & original description: CDS=1-2184 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11617 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g17711 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g21956 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g29372 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50428 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g52449 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo102603 | CRR2 | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| Smo77340 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g076150.4.1 | Solyc08g076150 | Pentatricopeptide repeat-containing protein At1g31920... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g096680.1.1 | REME1, Solyc12g096680 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06564 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g44644 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g45537 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06676 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08973 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g26598 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g30403 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44697 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021453_P001 | CRR28, Zm00001e021453 | Pentatricopeptide repeat-containing protein At5g06540... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 7 | 31 |
| No external refs found! |