AMTR_s00334p00014280 (PSBG,...)

Aliases : PSBG, evm_27.TU.AmTr_v1.0_scaffold00334.7

Description : Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex A.NdhK component

Gene families : OG0010313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010313_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00334p00014280
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
ATCG00420	NDHJ	NADH dehydrogenase subunit J	0.04	OrthoFinder output from all 47 species
Aev_g09764	NDHJ	component *(NdhJ) of NDH subcomplex A & original...	0.03	OrthoFinder output from all 47 species
Ceric.09G048100.1	NDHJ, Ceric.09G048100	component *(NdhJ) of NDH subcomplex A & original...	0.05	OrthoFinder output from all 47 species
Ceric.27G005900.1	NDHJ, Ceric.27G005900	component *(NdhJ) of NDH subcomplex A & original...	0.05	OrthoFinder output from all 47 species
LOC_Os01g58024.1	NDHJ, LOC_Os01g58024	component NdhJ of NDH subcomplex A	0.03	OrthoFinder output from all 47 species
LOC_Os10g38212.1	NDHJ, LOC_Os10g38212	component NdhJ of NDH subcomplex A	0.03	OrthoFinder output from all 47 species
Ore_g10963	NDHJ	component *(NdhJ) of NDH subcomplex A & original...	0.03	OrthoFinder output from all 47 species
Solyc00g500061.1.1	NDHJ, Solyc00g500061	component NdhJ of NDH subcomplex A	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003954	NADH dehydrogenase activity	None	Extended
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEA	Interproscan
MF	GO:0009055	electron transfer activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	None	Extended
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0048038	quinone binding	IEA	Interproscan
MF	GO:0050136	NADH dehydrogenase (quinone) activity	None	Extended
MF	GO:0051536	iron-sulfur cluster binding	None	Extended
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEA	Interproscan
MF	GO:0051540	metal cluster binding	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001268	NADH_UbQ_OxRdtase_30kDa_su	234	336
IPR006137	NADH_UbQ_OxRdtase-like_20kDa	47	154

External Links

No external refs found!