1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00268p00010890

AMTR_s00268p00010890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00268.7

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TRA1 component


Gene families : OG0002090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002090_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00268p00010890

Target Alias Description ECC score Gene Family Method Actions
AT2G17930 No alias Phosphatidylinositol 3- and 4-kinase family protein with... 0.07 OrthoFinder output from all 47 species
AT4G36080 No alias phosphotransferases, alcohol group as... 0.07 OrthoFinder output from all 47 species
Adi_g012013 No alias component *(TRA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Aev_g05547 No alias component *(TRA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Aob_g32646 No alias component *(TRA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Aop_g10616 No alias component *(TRA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Ceric.07G020000.1 Ceric.07G020000 component *(TRA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Dde_g21159 No alias component *(TRA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Ehy_g01717 No alias component *(TRA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
GSVIVT01018783001 No alias Protein modification.phosphorylation.atypical kinase... 0.07 OrthoFinder output from all 47 species
LOC_Os07g45070.1 LOC_Os07g45070 component TRA1 of SAGA transcription co-activator complex 0.05 OrthoFinder output from all 47 species
LOC_Os07g45074.1 LOC_Os07g45074 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10427352g0010 No alias component TRA1 of SAGA transcription co-activator complex 0.07 OrthoFinder output from all 47 species
MA_10427352g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g31775 No alias component *(TRA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Solyc02g083780.3.1 Solyc02g083780 protein kinase (PIKK) 0.02 OrthoFinder output from all 47 species
Solyc02g083900.3.1 Solyc02g083900 component TRA1 of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Zm00001e035713_P005 Zm00001e035713 component TRA1 of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!