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  5. AMTR_s00235p00022890

AMTR_s00235p00022890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00235.9

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL2-N-terminal component


Gene families : OG0011618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011618_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00235p00022890

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272560 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00235p00022820 RPL2,... 60S ribosomal protein L2, mitochondrial OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
AT2G07715 No alias Nucleic acid-binding, OB-fold-like protein 0.03 OrthoFinder output from all 47 species
ATMG00560 RPL2 Nucleic acid-binding, OB-fold-like protein 0.04 OrthoFinder output from all 47 species
Gb_28089 RPL2 component mtRPL2-N-terminal of large ribosomal subunit... 0.02 OrthoFinder output from all 47 species
Solyc00g500228.1.1 RPL2, Solyc00g500228 component mtRPL2-N-terminal of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR022666 Rbsml_prot_L2_RNA-bd_dom 50 92
No external refs found!